STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ09593.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
ALQ09592.1
Methylthioribulose-1-phosphate dehydratase; Catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ALQ09594.1
Acireductone dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.998
ALQ09591.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.843
ALQ09590.1
Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
ALQ09595.1
Methylthioribose-1-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.780
ALQ08848.1
Methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.697
ALQ09185.1
ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.646
ALQ09507.1
Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.641
ALQ09412.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.475
ALQ09589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
Your Current Organism:
Pseudoalteromonas sp. Bsw20308
NCBI taxonomy Id: 283699
Other names: P. sp. Bsw20308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.