STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC23568.1Helix-turn-helix domain-containing protein. (279 aa)    
Predicted Functional Partners:
SFC23594.1
Hypothetical protein.
       0.773
SFC23621.1
Helix-turn-helix.
       0.753
SFC23649.1
Putative HNHc nuclease.
       0.719
SFC23792.1
Holliday junction resolvase RusA (prophage-encoded endonuclease).
       0.674
SFC23758.1
Phage uncharacterized protein TIGR01671.
       0.625
SFC23681.1
Hypothetical protein.
       0.624
SFC23707.1
Hypothetical protein.
       0.624
SFC23731.1
Hypothetical protein.
       0.624
SFC23820.1
Protein of unknown function.
       0.596
Your Current Organism:
Fructobacillus durionis
NCBI taxonomy Id: 283737
Other names: CCUG 49949, DSM 19113, F. durionis, Fructobacillus durionis (Leisner et al. 2005) Endo and Okada 2008, JCM 17831, LMG 22556, LMG:22556, Leuconostoc durionis, Leuconostoc durionis Leisner et al. 2005, strain D-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.