STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB88350.1Cyanate permease. (390 aa)    
Predicted Functional Partners:
SFB93917.1
HlyD family secretion protein.
 
   0.609
SFC18103.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
  0.559
SFB88377.1
Uncharacterized membrane protein YczE.
       0.556
rpsU
SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.
       0.518
SFB87204.1
Uncharacterized membrane-anchored protein.
  
     0.477
SFB99233.1
Pyrimidine dimer DNA glycosylase /DNA-(apurinic or apyrimidinic site) lyase.
  
     0.465
SFB88402.1
DNA-binding transcriptional regulator, MarR family.
       0.402
Your Current Organism:
Fructobacillus durionis
NCBI taxonomy Id: 283737
Other names: CCUG 49949, DSM 19113, F. durionis, Fructobacillus durionis (Leisner et al. 2005) Endo and Okada 2008, JCM 17831, LMG 22556, LMG:22556, Leuconostoc durionis, Leuconostoc durionis Leisner et al. 2005, strain D-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.