STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH1CUSH1 protein network component harmonin. (870 aa)    
Predicted Functional Partners:
USH1G
USH1 protein network component sans.
    
 0.987
CDH23
Cadherin related 23.
   
 
 0.929
LOC100561734
ANK_REP_REGION domain-containing protein.
    
 0.894
anks4b
ANK_REP_REGION domain-containing protein.
    
 0.894
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.883
WHRN
Whirlin.
     
 0.856
PCDH15
Protocadherin related 15.
   
 
 0.840
CDHR2
Cadherin related family member 2.
   
 
 0.816
PDZD7
PDZ domain containing 7.
     
0.797
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
     
 0.795
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.