Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHF5A | SF3A3 | ENSACAP00000004647 | ENSACAP00000016838 | PHD finger protein 5A. | Splicing factor 3a subunit 3. | 0.990 |
PHF5A | SNRPA1 | ENSACAP00000004647 | ENSACAP00000003100 | PHD finger protein 5A. | Small nuclear ribonucleoprotein polypeptide A. | 0.995 |
PHF5A | SNRPB2 | ENSACAP00000004647 | ENSACAP00000000516 | PHD finger protein 5A. | Small nuclear ribonucleoprotein polypeptide B2. | 0.965 |
PHF5A | SNRPC | ENSACAP00000004647 | ENSACAP00000015455 | PHD finger protein 5A. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.926 |
PHF5A | SNRPD1 | ENSACAP00000004647 | ENSACAP00000006209 | PHD finger protein 5A. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.976 |
PHF5A | SNRPD2 | ENSACAP00000004647 | ENSACAP00000016502 | PHD finger protein 5A. | Small nuclear ribonucleoprotein Sm D2. | 0.992 |
PHF5A | SNRPD3 | ENSACAP00000004647 | ENSACAP00000003218 | PHD finger protein 5A. | Small nuclear ribonucleoprotein D3 polypeptide. | 0.988 |
PHF5A | SNRPE | ENSACAP00000004647 | ENSACAP00000009865 | PHD finger protein 5A. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.998 |
PHF5A | SNRPF | ENSACAP00000004647 | ENSACAP00000013798 | PHD finger protein 5A. | Small nuclear ribonucleoprotein polypeptide F. | 0.995 |
PHF5A | SNRPG | ENSACAP00000004647 | ENSACAP00000007711 | PHD finger protein 5A. | Small nuclear ribonucleoprotein G. | 0.999 |
SF3A3 | PHF5A | ENSACAP00000016838 | ENSACAP00000004647 | Splicing factor 3a subunit 3. | PHD finger protein 5A. | 0.990 |
SF3A3 | SNRPA1 | ENSACAP00000016838 | ENSACAP00000003100 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein polypeptide A. | 0.999 |
SF3A3 | SNRPB2 | ENSACAP00000016838 | ENSACAP00000000516 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein polypeptide B2. | 0.955 |
SF3A3 | SNRPC | ENSACAP00000016838 | ENSACAP00000015455 | Splicing factor 3a subunit 3. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.948 |
SF3A3 | SNRPD1 | ENSACAP00000016838 | ENSACAP00000006209 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.997 |
SF3A3 | SNRPD2 | ENSACAP00000016838 | ENSACAP00000016502 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein Sm D2. | 0.994 |
SF3A3 | SNRPD3 | ENSACAP00000016838 | ENSACAP00000003218 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein D3 polypeptide. | 0.982 |
SF3A3 | SNRPE | ENSACAP00000016838 | ENSACAP00000009865 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.990 |
SF3A3 | SNRPF | ENSACAP00000016838 | ENSACAP00000013798 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein polypeptide F. | 0.992 |
SF3A3 | SNRPG | ENSACAP00000016838 | ENSACAP00000007711 | Splicing factor 3a subunit 3. | Small nuclear ribonucleoprotein G. | 0.991 |
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