DNAJB12 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DNAJB12

DnaJ heat shock protein family (Hsp40) member B12. (412 aa)

Predicted Functional Partners:

HSPA9

0.826

HSPA5

0.739

HSPA2

0.706

HSPA8

0.703

LOC100554364

0.703

HSPA13

0.662

hspa14

0.661

HSPA4

0.661

HSPA4L

0.628

G1KUA1_ANOCA

0.619

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJB12	G1KUA1_ANOCA	ENSACAP00000001002	ENSACAP00000017404	DnaJ heat shock protein family (Hsp40) member B12.	NDK domain-containing protein; Belongs to the NDK family.	0.619
DNAJB12	HSPA13	ENSACAP00000001002	ENSACAP00000000965	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 13.	0.662
DNAJB12	HSPA2	ENSACAP00000001002	ENSACAP00000015494	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family.	0.706
DNAJB12	HSPA4	ENSACAP00000001002	ENSACAP00000023153	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 4.	0.661
DNAJB12	HSPA4L	ENSACAP00000001002	ENSACAP00000011642	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 4 like.	0.628
DNAJB12	HSPA5	ENSACAP00000001002	ENSACAP00000004078	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	0.739
DNAJB12	HSPA8	ENSACAP00000001002	ENSACAP00000004798	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family.	0.703
DNAJB12	HSPA9	ENSACAP00000001002	ENSACAP00000015698	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	0.826
DNAJB12	LOC100554364	ENSACAP00000001002	ENSACAP00000023104	DnaJ heat shock protein family (Hsp40) member B12.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.703
DNAJB12	hspa14	ENSACAP00000001002	ENSACAP00000001088	DnaJ heat shock protein family (Hsp40) member B12.	Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.	0.661
G1KUA1_ANOCA	DNAJB12	ENSACAP00000017404	ENSACAP00000001002	NDK domain-containing protein; Belongs to the NDK family.	DnaJ heat shock protein family (Hsp40) member B12.	0.619
G1KUA1_ANOCA	HSPA13	ENSACAP00000017404	ENSACAP00000000965	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 13.	0.532
G1KUA1_ANOCA	HSPA2	ENSACAP00000017404	ENSACAP00000015494	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family.	0.532
G1KUA1_ANOCA	HSPA4	ENSACAP00000017404	ENSACAP00000023153	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 4.	0.498
G1KUA1_ANOCA	HSPA4L	ENSACAP00000017404	ENSACAP00000011642	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 4 like.	0.498
G1KUA1_ANOCA	HSPA5	ENSACAP00000017404	ENSACAP00000004078	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	0.578
G1KUA1_ANOCA	HSPA8	ENSACAP00000017404	ENSACAP00000004798	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family.	0.532
G1KUA1_ANOCA	HSPA9	ENSACAP00000017404	ENSACAP00000015698	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family.	0.787
G1KUA1_ANOCA	LOC100554364	ENSACAP00000017404	ENSACAP00000023104	NDK domain-containing protein; Belongs to the NDK family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.532
G1KUA1_ANOCA	hspa14	ENSACAP00000017404	ENSACAP00000001088	NDK domain-containing protein; Belongs to the NDK family.	Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.	0.532