Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fam120aUncharacterized protein. (575 aa)    
Predicted Functional Partners:
H9GSC8_ANOCA
Uncharacterized protein.
 
     0.941
MTREX
Mtr4 exosome RNA helicase.
      
 0.691
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 
 0.580
KRI1
KRI1 homolog.
      
 0.570
AP3B1
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
  
 0.565
utp14a
Uncharacterized protein.
      
 0.562
IPO7
Importin 7.
      
 0.549
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
      
 0.549
AP3D1
Adaptor related protein complex 3 subunit delta 1.
   
  
 0.546
R4GCK7_ANOCA
Uncharacterized protein.
    
   0.513
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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