STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX22T-box transcription factor 22. (400 aa)    
Predicted Functional Partners:
TBX2
T-box transcription factor 2.
 
      0.786
CLPP
ATP-dependent Clp protease proteolytic subunit.
      
 0.681
MEOX2
Mesenchyme homeobox 2.
    
 
 0.613
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.597
Clps
Colipase domain-containing protein.
      
 0.569
SHOX2
Short stature homeobox 2.
    
 
 0.548
RGS9BP
Regulator of G protein signaling 9 binding protein.
   
    0.545
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.503
MSX1
Msh homeobox 1.
    
 
 0.481
LHX8
LIM homeobox 8.
    
 
 0.477
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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