Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB30RAB30, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
AVL9
AVL9 cell migration associated.
      
 0.897
COG4
Component of oligomeric golgi complex 4.
    
 0.873
chm
Uncharacterized protein.
    
 0.865
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.810
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
     
 0.800
COG1
Component of oligomeric golgi complex 1.
     
 0.751
COG5
Component of oligomeric golgi complex 5.
     
 0.750
CCDC186
Coiled-coil domain containing 186.
    
 
 0.703
COG3
Component of oligomeric golgi complex 3.
     
 0.696
LOC100567037
Uncharacterized protein.
     
 0.687
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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