STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB30RAB30, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4.
    
 0.831
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.786
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
     
 0.769
chm
Uncharacterized protein.
    
 0.743
COG3
Component of oligomeric golgi complex 3.
    
 0.714
COG1
Component of oligomeric golgi complex 1.
     
 0.709
COG5
Component of oligomeric golgi complex 5.
     
 0.700
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
  0.660
CRACR2A
Calcium release activated channel regulator 2A.
 
   
  0.651
RAB39A
RAB39A, member RAS oncogene family.
  
  
 
0.646
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.