Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC34Cell division cycle 34; Belongs to the ubiquitin-conjugating enzyme family. (108 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
   
 0.902
UBE2R2
Ubiquitin conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.900
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.888
rps27a
Ubiquitin-like domain-containing protein.
    
 0.855
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.852
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.848
RNF7
Ring finger protein 7.
   
 0.821
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.820
H9GK63_ANOCA
Uncharacterized protein.
    
 0.790
ubc
Uncharacterized protein.
    
 0.790
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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