STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1151 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.748
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.688
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
      
 0.684
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
      
 0.672
ppan
Brix domain-containing protein.
      
 0.661
KHSRP
KH-type splicing regulatory protein.
      
 0.659
MBNL1
Muscleblind like splicing regulator 1.
      
 0.656
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
0.505
ccdc51
Uncharacterized protein.
      
 0.469
POU2AF1
POU class 2 homeobox associating factor 1.
      
 0.463
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.