LSM10 protein (Anolis carolinensis) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

LSM10

LSM10, U7 small nuclear RNA associated. (123 aa)

Predicted Functional Partners:

SNRPF

0.997

SNRPD3

0.995

SNRPE

0.993

SNRPG

0.992

SNRPD2

0.989

Lsm11

0.959

EFTUD2

0.958

LOC100565538

0.950

NCBP1

0.949

PRPF8

0.948

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTUD2	LOC100565538	ENSACAP00000007670	ENSACAP00000014847	Elongation factor Tu GTP binding domain containing 2.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.916
EFTUD2	LSM10	ENSACAP00000007670	ENSACAP00000001122	Elongation factor Tu GTP binding domain containing 2.	LSM10, U7 small nuclear RNA associated.	0.958
EFTUD2	NCBP1	ENSACAP00000007670	ENSACAP00000004405	Elongation factor Tu GTP binding domain containing 2.	Nuclear cap binding protein subunit 1.	0.835
EFTUD2	PRPF8	ENSACAP00000007670	ENSACAP00000014503	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 8.	0.999
EFTUD2	SNRPD2	ENSACAP00000007670	ENSACAP00000016502	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein Sm D2.	0.999
EFTUD2	SNRPD3	ENSACAP00000007670	ENSACAP00000003218	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein D3 polypeptide.	0.999
EFTUD2	SNRPE	ENSACAP00000007670	ENSACAP00000009865	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
EFTUD2	SNRPF	ENSACAP00000007670	ENSACAP00000013798	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
EFTUD2	SNRPG	ENSACAP00000007670	ENSACAP00000007711	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein G.	0.998
LOC100565538	EFTUD2	ENSACAP00000014847	ENSACAP00000007670	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Elongation factor Tu GTP binding domain containing 2.	0.916
LOC100565538	LSM10	ENSACAP00000014847	ENSACAP00000001122	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	LSM10, U7 small nuclear RNA associated.	0.950
LOC100565538	Lsm11	ENSACAP00000014847	ENSACAP00000003210	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Uncharacterized protein.	0.659
LOC100565538	NCBP1	ENSACAP00000014847	ENSACAP00000004405	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap binding protein subunit 1.	0.999
LOC100565538	PRPF8	ENSACAP00000014847	ENSACAP00000014503	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Pre-mRNA processing factor 8.	0.906
LOC100565538	SNRPD2	ENSACAP00000014847	ENSACAP00000016502	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein Sm D2.	0.996
LOC100565538	SNRPD3	ENSACAP00000014847	ENSACAP00000003218	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein D3 polypeptide.	0.986
LOC100565538	SNRPE	ENSACAP00000014847	ENSACAP00000009865	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
LOC100565538	SNRPF	ENSACAP00000014847	ENSACAP00000013798	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein polypeptide F.	0.997
LOC100565538	SNRPG	ENSACAP00000014847	ENSACAP00000007711	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein G.	0.998
LSM10	EFTUD2	ENSACAP00000001122	ENSACAP00000007670	LSM10, U7 small nuclear RNA associated.	Elongation factor Tu GTP binding domain containing 2.	0.958