STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROG1Neurogenin 1. (228 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 
 0.648
INSM1
INSM transcriptional repressor 1.
   
 0.609
NKX2-2
NK2 homeobox 2.
   
 0.515
FEZF2
FEZ family zinc finger 2.
    
 
 0.443
FOXG1
Forkhead box G1.
   
  
 0.437
LOC100565628
ATP-grasp domain-containing protein.
   
  
 0.423
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
  
 0.423
FGF3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.402
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.