STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103282677Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.756
TRMT10B
tRNA methyltransferase 10B.
   
 0.571
TRMT10A
tRNA methyltransferase 10A.
   
 0.571
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.571
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.554
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.554
TBPL1
TATA-box binding protein like 1.
   
  
 0.522
tbpl2
Uncharacterized protein.
   
  
 0.522
tbp
Uncharacterized protein.
   
  
 0.522
CCNE2
Cyclin E2; Belongs to the cyclin family.
   
  
 0.506
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.