STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100561581RING-type domain-containing protein. (343 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
  0.957
Usp30
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 0.808
TMEM115
Transmembrane protein 115.
   
    0.661
TOMM70
Translocase of outer mitochondrial membrane 70.
     
 0.661
fkbp8
Peptidylprolyl isomerase.
     
 0.619
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.601
rps27a
Ubiquitin-like domain-containing protein.
    
  0.582
CCDC22
Coiled-coil domain containing 22.
   
 
  0.555
Park2
RBR-type E3 ubiquitin transferase.
    
 
 0.550
TOMM20L
Translocase of outer mitochondrial membrane 20 like.
     
 0.537
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.