Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A9Solute carrier family 12 member 9. (416 aa)    
Predicted Functional Partners:
GIGYF1
GRB10 interacting GYF protein 1.
      
 0.829
SRRT
Serrate, RNA effector molecule.
      
 0.769
tfr2
Uncharacterized protein.
      
 0.689
SERPINE1
Serpin family E member 1; Belongs to the serpin family.
   
 
 0.669
EPHB4
EPH receptor B4.
    
 0.565
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
 
    
 0.526
LOC100554721
AA_permease domain-containing protein.
  
   
 0.518
PASK
PAS domain containing serine/threonine kinase.
    
 0.505
TM7SF3
Transmembrane 7 superfamily member 3.
      
 0.500
wbp2nl
GRAM domain-containing protein.
      
 0.494
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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