Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bloc1s4Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
bloc1s5
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
    
 0.994
bloc1s1
Uncharacterized protein.
    
 0.991
bloc1s3
Uncharacterized protein.
    
 0.988
SNAPIN
SNAP associated protein.
    
 0.983
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
   
 0.977
DTNBP1
Dystrobrevin binding protein 1.
   
 0.969
BCAS4
Breast carcinoma amplified sequence 4.
  
  
 
0.903
WASHC3
WASH complex subunit 3.
    
   0.900
HPS6
HPS6 biogenesis of lysosomal organelles complex 2 subunit 3.
     
 0.860
NUDT15
Nudix hydrolase 15.
      
 0.734
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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