STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsnaxip1Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.607
ARID4A
AT-rich interaction domain 4A.
    
 0.607
CFAP65
Cilia and flagella associated protein 65.
   
  0.595
FANCM
FA complementation group M.
    
 0.593
ADAD1
Adenosine deaminase domain containing 1.
   
  
 0.580
CCDC146
Coiled-coil domain containing 146.
   
 0.556
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.552
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.552
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.550
H9G613_ANOCA
Uncharacterized protein.
   
  
 0.550
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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