Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNDIG1Synapse differentiation inducing 1. (256 aa)    
Predicted Functional Partners:
GSG1L2
GSG1 like 2.
      
 0.586
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
      
 0.585
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.585
Fundc2
Uncharacterized protein.
      
 0.534
NAV2
Neuron navigator 2.
   
  
 0.529
MPZL1
Myelin protein zero like 1.
      
 0.515
UNC13D
Unc-13 homolog D.
      
 0.512
mgat5b
Uncharacterized protein.
      
 0.510
LOC103282218
Uncharacterized protein.
      
 0.510
rapgef6
Uncharacterized protein.
      
 0.496
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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