STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103282895Helicase ATP-binding domain-containing protein. (139 aa)    
Predicted Functional Partners:
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.966
DDX52
DExD-box helicase 52.
  
0.949
DDX10
RNA helicase.
  
  
0.935
RBM19
RNA binding motif protein 19.
   
 
 0.934
DDX24
DEAD-box helicase 24.
  
 
 0.913
NOP14
NOP14 nucleolar protein.
   
 0.909
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.908
DDX18
RNA helicase.
  
 
0.906
RBM34
RNA binding motif protein 34.
   
 0.904
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.902
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.