Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abcc3Uncharacterized protein. (1528 aa)    
Predicted Functional Partners:
ABCC5
ATP binding cassette subfamily C member 5.
     
0.945
ABCC4
ATP binding cassette subfamily C member 4.
  
  
0.937
acy1
M20_dimer domain-containing protein.
      
 0.694
ABCA2
ATP binding cassette subfamily A member 2.
   
 0.630
LOC100567919
ABC transporter domain-containing protein.
   
 0.566
LOC100567722
Uncharacterized protein.
   
 0.566
ABCG8
ATP binding cassette subfamily G member 8.
   
 0.514
gopc
PDZ domain-containing protein.
    
 0.491
ABCF3
ATP binding cassette subfamily F member 3.
     
 0.489
PDZK1
PDZ domain containing 1.
    
 0.477
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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