Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC5Transmembrane channel-like protein. (507 aa)    
Predicted Functional Partners:
RASA1
RAS p21 protein activator 1.
    
 
 0.588
SYNGR2
Synaptogyrin 2.
      
 0.588
SKIV2L
Ski2 like RNA helicase.
    
 0.587
azin2
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
      
 0.573
TMC8
Transmembrane channel-like protein.
      
 0.569
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
     
 0.568
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.542
KNTC1
Kinetochore associated 1.
      
 0.535
EFHB
EF-hand domain family member B.
    
 
 0.502
dnajc14
J domain-containing protein.
      
 0.501
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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