Perm1 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

Perm1

Uncharacterized protein. (69 aa)

Predicted Functional Partners:

NOC2L

0.735

SLC25A36

0.705

NDUFAF7

0.699

TFB2M

0.696

KLHL17

0.694

SPSB1

0.694

spsb4

0.694

ttc16

0.627

LOC100554849

0.610

SAMD11

0.574

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLHL17	LOC100554849	ENSACAP00000001479	ENSACAP00000017672	Kelch like family member 17.	Uncharacterized protein.	0.497
KLHL17	NOC2L	ENSACAP00000001479	ENSACAP00000008439	Kelch like family member 17.	NOC2 like nucleolar associated transcriptional repressor.	0.716
KLHL17	Perm1	ENSACAP00000001479	ENSACAP00000001495	Kelch like family member 17.	Uncharacterized protein.	0.694
KLHL17	SAMD11	ENSACAP00000001479	ENSACAP00000008475	Kelch like family member 17.	Sterile alpha motif domain containing 11.	0.416
KLHL17	SLC25A36	ENSACAP00000001479	ENSACAP00000013744	Kelch like family member 17.	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.701
KLHL17	SPSB1	ENSACAP00000001479	ENSACAP00000008969	Kelch like family member 17.	SplA/ryanodine receptor domain and SOCS box containing 1.	0.726
KLHL17	spsb4	ENSACAP00000001479	ENSACAP00000015210	Kelch like family member 17.	Uncharacterized protein.	0.725
LOC100554849	KLHL17	ENSACAP00000017672	ENSACAP00000001479	Uncharacterized protein.	Kelch like family member 17.	0.497
LOC100554849	NOC2L	ENSACAP00000017672	ENSACAP00000008439	Uncharacterized protein.	NOC2 like nucleolar associated transcriptional repressor.	0.675
LOC100554849	Perm1	ENSACAP00000017672	ENSACAP00000001495	Uncharacterized protein.	Uncharacterized protein.	0.610
LOC100554849	SAMD11	ENSACAP00000017672	ENSACAP00000008475	Uncharacterized protein.	Sterile alpha motif domain containing 11.	0.655
LOC100554849	SLC25A36	ENSACAP00000017672	ENSACAP00000013744	Uncharacterized protein.	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.490
LOC100554849	SPSB1	ENSACAP00000017672	ENSACAP00000008969	Uncharacterized protein.	SplA/ryanodine receptor domain and SOCS box containing 1.	0.591
LOC100554849	spsb4	ENSACAP00000017672	ENSACAP00000015210	Uncharacterized protein.	Uncharacterized protein.	0.591
NDUFAF7	Perm1	ENSACAP00000001295	ENSACAP00000001495	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).	Uncharacterized protein.	0.699
NDUFAF7	TFB2M	ENSACAP00000001295	ENSACAP00000011692	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.720
NOC2L	KLHL17	ENSACAP00000008439	ENSACAP00000001479	NOC2 like nucleolar associated transcriptional repressor.	Kelch like family member 17.	0.716
NOC2L	LOC100554849	ENSACAP00000008439	ENSACAP00000017672	NOC2 like nucleolar associated transcriptional repressor.	Uncharacterized protein.	0.675
NOC2L	Perm1	ENSACAP00000008439	ENSACAP00000001495	NOC2 like nucleolar associated transcriptional repressor.	Uncharacterized protein.	0.735
NOC2L	SAMD11	ENSACAP00000008439	ENSACAP00000008475	NOC2 like nucleolar associated transcriptional repressor.	Sterile alpha motif domain containing 11.	0.679