STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (455 aa)    
Predicted Functional Partners:
ttc9c
TPR_REGION domain-containing protein.
      
 0.581
sqor
Uncharacterized protein.
      
 0.567
BTBD10
BTB domain containing 10.
      
 0.461
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.461
ARHGAP1
Rho GTPase activating protein 1.
      
 0.457
CCN6
Cellular communication network factor 6.
      
 0.416
LOC100557138
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.404
LOC100556942
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.404
brinp1
MACPF domain-containing protein.
      
 0.400
H9GVP6_ANOCA
MACPF domain-containing protein.
      
 0.400
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.