Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Vwa8Uncharacterized protein. (788 aa)    
Predicted Functional Partners:
G1KXH6_ANOCA
VWFA domain-containing protein.
 
     0.940
C19orf47
Chromosome 19 open reading frame 47.
   
    0.919
NUDT12
Nudix hydrolase 12.
   
 0.656
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.601
TRMT61B
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
      
 0.590
FAAP24
FA core complex associated protein 24.
     
 0.586
C1orf194
Chromosome 1 open reading frame 194.
    
 
 0.566
FANCM
FA complementation group M.
    
 0.543
WBP4
WW domain binding protein 4.
      
 0.538
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.530
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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