Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNL1Cyclin L1; Belongs to the cyclin family. (593 aa)    
Predicted Functional Partners:
LOC100563645
Uncharacterized protein.
   
 
 0.910
LOC100563505
Protein kinase domain-containing protein.
   
 
 0.910
CCNL2
Cyclin L2; Belongs to the cyclin family.
   
   0.905
SAP30BP
SAP30 binding protein.
    
   0.897
ILF3
Interleukin enhancer binding factor 3.
    
   0.876
CDK10
Cyclin dependent kinase 10.
   
 
 0.771
ZNF276
Zinc finger protein 276.
   
  
 0.717
GPATCH2
G-patch domain containing 2.
   
   0.682
CDK9
Cyclin dependent kinase 9.
      
 0.667
hnrnph1
Uncharacterized protein.
   
 
 0.654
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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