Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (464 aa)    
Predicted Functional Partners:
PNISR
PNN interacting serine and arginine rich protein.
   
  
 0.991
RBM25
RNA binding motif protein 25.
   
 0.989
LUC7L
LUC7 like.
  
0.976
LOC100563954
Uncharacterized protein.
  
0.976
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.974
PRPF39
Pre-mRNA processing factor 39.
   
 0.972
SF3B1
Splicing factor 3b subunit 1.
   
 0.972
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.972
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.966
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.962
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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