STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (507 aa)    
Predicted Functional Partners:
UBXN6
UBX domain protein 6.
    
 
 0.980
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.978
LOC100566348
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.907
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 
 0.819
UBXN7
UBX domain-containing protein 7.
      
 0.687
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.686
UBE4A
Ubiquitination factor E4A.
    
 
 0.652
SPATA5
Spermatogenesis associated 5.
   
 
 0.632
SPATA5L1
Spermatogenesis associated 5 like 1; Belongs to the AAA ATPase family.
   
 
 0.632
UBE4B
Ubiquitination factor E4B.
    
 
 0.573
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.