Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDF2L1Stromal cell derived factor 2 like 1. (217 aa)    
Predicted Functional Partners:
dnajb11
J domain-containing protein.
   
 
 0.873
SNX1
Sorting nexin 1.
    
 
 0.753
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.745
CRELD2
Cysteine rich with EGF like domains 2.
   
 
 0.645
RRAGB
Ras related GTP binding B.
      
 0.592
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
   
 
 0.580
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.578
VDAC1
Voltage dependent anion channel 1.
    
 
 0.572
H9GRP4_ANOCA
Uncharacterized protein.
      
 0.568
H9G984_ANOCA
Uncharacterized protein.
      
 0.564
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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