STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM23RNA binding motif protein 23. (466 aa)    
Predicted Functional Partners:
son
Uncharacterized protein.
   
  0.882
CDC5L
Cell division cycle 5 like.
   
 
 0.857
RBM25
RNA binding motif protein 25.
   
0.828
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.827
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.778
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
  0.722
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.719
DDA1
DET1 and DDB1 associated 1.
    
 
 0.709
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.706
ddx5
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.700
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.