STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP3RNA polymerase II associated protein 3. (739 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.991
PIH1D1
PIH1 domain containing 1.
   
 0.991
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.981
WDR92
WD repeat domain 92.
   
 0.936
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.896
UXT
Ubiquitously expressed prefoldin like chaperone.
    
 0.895
PIH1D2
PIH1 domain containing 2.
   
 0.866
H9GVV6_ANOCA
Uncharacterized protein.
   
 0.848
URI1
URI1 prefoldin like chaperone.
    
 0.846
ACTR5
Actin related protein 5; Belongs to the actin family.
   
 0.841
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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