Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100560393Uncharacterized protein. (598 aa)    
Predicted Functional Partners:
H9GTL5_ANOCA
Uncharacterized protein.
    
  0.643
plekhb1
Uncharacterized protein.
    
   0.593
FBXL4
F-box and leucine rich repeat protein 4.
      
 0.579
STPG2
Sperm tail PG-rich repeat containing 2.
      
 0.571
ZFP36L2
ZFP36 ring finger protein like 2.
    
 
 0.549
DNAL1
Dynein axonemal light chain 1.
    
   0.539
RAC3
Rac family small GTPase 3.
    
  0.520
RAC1
Rac family small GTPase 1.
    
  0.520
RAC2
Rac family small GTPase 2.
    
  0.520
CCDC126
Coiled-coil domain containing 126.
      
 0.514
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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