STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDLBPHigh density lipoprotein binding protein. (1267 aa)    
Predicted Functional Partners:
RACK1
Receptor for activated C kinase 1.
   
 
 0.664
apoe
Uncharacterized protein.
     
 0.633
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.518
LOC100551975
Eukaryotic translation elongation factor 1 gamma.
   
   0.491
LOC100559904
Uncharacterized protein; Belongs to the GST superfamily.
   
   0.491
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
   0.483
BAX
BCL2 associated X, apoptosis regulator.
      
 0.435
eif6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
      
 0.434
SAE1
SUMO1 activating enzyme subunit 1.
    
 
 0.429
DECR1
2,4-dienoyl-CoA reductase 1.
    
 
 0.422
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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