Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKAP7A-kinase anchoring protein 7. (271 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
    
   0.897
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.891
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
   0.891
AKAP6
A-kinase anchoring protein 6.
      
 0.786
AKAP1
A-kinase anchoring protein 1.
      
 0.712
EMP1
Epithelial membrane protein 1.
      
 0.710
TRIP4
Thyroid hormone receptor interactor 4.
   
 
 0.666
Prkaca
Uncharacterized protein.
    
 
 0.657
LOC103279522
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.657
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.657
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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