STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSF1Remodeling and spacing factor 1. (1347 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.901
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.852
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.789
CHRAC1
Chromatin accessibility complex subunit 1.
     
 0.714
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
     
0.673
sf1
CCHC-type domain-containing protein.
    
 
 0.662
SRSF7
Serine and arginine rich splicing factor 7.
      
 0.658
CECR2
CECR2 histone acetyl-lysine reader.
    
0.603
ARID4B
AT-rich interaction domain 4B.
   
    0.587
NIPBL
Nipped-B protein.
   
 
 0.579
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.