Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
prorpPRORP domain-containing protein. (511 aa)    
Predicted Functional Partners:
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.985
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.983
POP5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.810
RMND1
Required for meiotic nuclear division 1 homolog.
   
  
 0.763
HARBI1
Harbinger transposase derived 1.
      
 0.710
PEX6
Peroxisomal biogenesis factor 6.
      
 0.706
Eral1
Uncharacterized protein.
     
 0.703
TWNK
Twinkle mtDNA helicase.
      
 0.702
RPP21
Ribonuclease P/MRP subunit p21.
     
 0.682
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.668
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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