Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100563645Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
CCNL1
Cyclin L1; Belongs to the cyclin family.
   
 
 0.910
LOC100563505
Protein kinase domain-containing protein.
 
      0.900
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
 
 
 0.900
CDK10
Cyclin dependent kinase 10.
 
  
   0.900
SAP30BP
SAP30 binding protein.
   
   0.889
CDK6
Cyclin dependent kinase 6.
 
 
 0.883
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
 
 
 0.871
CDK4
Cyclin dependent kinase 4; Belongs to the protein kinase superfamily.
 
 
 0.827
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
 
  
 
 0.804
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
 
 
 0.756
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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