Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A4Solute carrier family 38 member 4. (551 aa)    
Predicted Functional Partners:
SFMBT2
Scm like with four mbt domains 2.
      
 0.934
SLC7A1
Solute carrier family 7 member 1.
   
  
 0.712
SLC1A7
Amino acid transporter.
      
 0.710
SLC1A1
Amino acid transporter.
      
 0.709
LOC100559998
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.617
SLC1A4
Solute carrier family 1 member 4.
   
  
 0.611
SLC1A5
Amino acid transporter.
   
  
 0.611
JADE1
Jade family PHD finger 1.
      
 0.610
SLC38A9
Solute carrier family 38 member 9.
      
 0.597
FGG
Fibrinogen gamma chain.
   
  
 0.597
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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