Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPP6CSerine/threonine-protein phosphatase. (279 aa)    
Predicted Functional Partners:
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
   
 0.995
TIPRL
TOR signaling pathway regulator.
   
 
 0.983
igbp1
Uncharacterized protein.
   
 
 0.979
ppp6r2
Uncharacterized protein.
   
 0.962
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
   
 0.962
PRKDC
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.917
ANKRD28
Ankyrin repeat domain 28.
    
 0.885
ANKRD52
Ankyrin repeat domain 52.
    
 0.885
ANKRD44
Ankyrin repeat domain 44.
    
 0.885
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.881
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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