STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103281743Uncharacterized protein; Belongs to the peptidase C19 family. (453 aa)    
Predicted Functional Partners:
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.980
SPATA2
Spermatogenesis associated 2.
     
 0.958
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.956
LOC100556341
Death domain-containing protein.
    
 0.936
SPATA2L
Spermatogenesis associated 2 like.
     
  0.900
rps27a
Ubiquitin-like domain-containing protein.
   
  0.899
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.850
rnf31
Uncharacterized protein.
    
 0.847
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.844
H9GK63_ANOCA
Uncharacterized protein.
   
  0.777
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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