Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc96DUF4201 domain-containing protein. (457 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
    
 0.914
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.902
CCDC113
Coiled-coil domain containing 113.
   
 
 0.890
C5orf49
Chromosome 5 open reading frame 49.
    
 
 0.885
Cfap20
DUF667 domain-containing protein.
    
 
 0.882
C4orf47
Chromosome 4 open reading frame 47.
    
 0.879
dnai2
WD_REPEATS_REGION domain-containing protein.
  
 0.877
DNAI1
Dynein axonemal intermediate chain 1.
    
 0.859
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.857
CCDC39
Coiled-coil domain containing 39.
    
 
 0.852
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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