Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Coiled-coil domain containing 138. (662 aa)    
Predicted Functional Partners:
CCDC186
Coiled-coil domain containing 186.
      
 0.812
RABL6
RAB, member RAS oncogene family like 6.
      
 0.753
VPS53
VPS53 subunit of GARP complex.
      
 0.730
PIBF1
Progesterone immunomodulatory binding factor 1.
   
 
 0.727
CCDC22
Coiled-coil domain containing 22.
      
 0.710
FOPNL
FGFR1OP N-terminal like.
      
 0.709
VPS52
VPS52 subunit of GARP complex.
      
 0.704
VPS51
VPS51 subunit of GARP complex.
      
 0.695
TBC1D31
TBC1 domain family member 31.
   
  
 0.687
VPS54
VPS54 subunit of GARP complex.
      
 0.682
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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