STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Coiled-coil domain containing 138. (662 aa)    
Predicted Functional Partners:
TBC1D31
TBC1 domain family member 31.
      
 0.681
CCDC186
Coiled-coil domain containing 186.
      
 0.634
PIBF1
Progesterone immunomodulatory binding factor 1.
   
 
 0.591
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.574
RABL6
RAB, member RAS oncogene family like 6.
      
 0.572
VPS51
VPS51 subunit of GARP complex.
      
 0.563
WDR90
WD repeat domain 90.
      
 0.563
ANKRD55
Ankyrin repeat domain 55.
    
 
 0.557
FOPNL
FGFR1OP N-terminal like.
      
 0.553
CCDC22
Coiled-coil domain containing 22.
      
 0.551
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.