Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100567041Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
ASCC3
Activating signal cointegrator 1 complex subunit 3.
    
 0.987
TRIP4
Thyroid hormone receptor interactor 4.
   
 0.983
ASCC1
Activating signal cointegrator 1 complex subunit 1.
    
 0.971
G1K978_ANOCA
CUE domain-containing protein.
 
     0.936
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
    
 0.910
HFM1
Helicase for meiosis 1.
    
 0.821
ZNF598
Zinc finger protein 598.
    
 0.694
H9GK63_ANOCA
Uncharacterized protein.
   
  0.650
ubc
Uncharacterized protein.
   
  0.650
AKAP7
A-kinase anchoring protein 7.
    
 0.619
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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