STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC113Coiled-coil domain containing 113. (204 aa)    
Predicted Functional Partners:
CCDC92
Coiled-coil domain containing 92.
      
 0.574
LZTFL1
Leucine zipper transcription factor like 1.
      
 0.542
CCDC125
Coiled-coil domain containing 125.
      
 0.541
cfap206
Uncharacterized protein.
  
  
 0.506
MLF1
Myeloid leukemia factor 1.
      
 0.501
G1KN91_ANOCA
Uncharacterized protein.
   
  
 0.497
ccdc96
DUF4201 domain-containing protein.
   
 
0.494
CCDC149
Coiled-coil domain containing 149.
      
 0.474
G1KKT9_ANOCA
Uncharacterized protein.
   
  
 0.474
DNALI1
Dynein axonemal light intermediate chain 1.
  
  
 0.474
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.