STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9G613_ANOCAUncharacterized protein. (204 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.737
WDR90
WD repeat domain 90.
    
   0.683
CCDC65
Coiled-coil domain containing 65.
   
 
 0.642
SAXO2
Stabilizer of axonemal microtubules 2.
   
 
 0.614
LRRC34
Leucine rich repeat containing 34.
    
 
 0.604
DLEC1
DLEC1 cilia and flagella associated protein.
    
 
 0.602
SPATA18
Spermatogenesis associated 18.
   
  
 0.601
CFAP161
Cilia and flagella associated protein 161.
   
  
 0.580
CCDC146
Coiled-coil domain containing 146.
      
 0.573
Tsnaxip1
Uncharacterized protein.
   
  
 0.550
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.