STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (274 aa)    
Predicted Functional Partners:
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.671
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.517
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.513
LCP2
Lymphocyte cytosolic protein 2.
    
 0.503
cdh12
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.496
SST
Somatostatin.
   
  
 0.491
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 
 0.483
WDR24
WD repeat domain 24.
    
 
 0.475
WDR59
WD repeat domain 59.
    
 
 0.464
depdc5
Uncharacterized protein.
    
 
 0.463
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.