STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX21SRY-box transcription factor 21. (280 aa)    
Predicted Functional Partners:
pou5f1
POU domain protein.
    
 0.741
LOC100557674
Homeobox domain-containing protein.
    
 0.620
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.604
CTNNB1
Catenin beta 1.
    
 0.557
JUP
Junction plakoglobin.
    
 0.557
RAB27B
RAB27B, member RAS oncogene family.
   
 
 0.491
eif1ax
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.487
MBNL2
Muscleblind like splicing regulator 2.
      
 0.481
NPSR1
Neuropeptide S receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.476
DMRTA2
DMRT like family A2.
    
 0.467
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.