STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100552428Uncharacterized protein. (710 aa)    
Predicted Functional Partners:
PRKCI
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.594
IFT57
Intraflagellar transport 57.
    
 0.543
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
    
 0.531
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 0.531
MPP7
Membrane palmitoylated protein 7; Belongs to the MAGUK family.
    
 0.531
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.528
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.525
SLC16A14
Solute carrier family 16 member 14.
    
 
 0.524
IFT80
Intraflagellar transport 80.
    
 0.512
IFT88
Intraflagellar transport 88.
    
 0.500
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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