Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CELSR1 | HOPX | ENSACAP00000007545 | ENSACAP00000002483 | Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family. | HOP homeobox. | 0.454 |
CLIC5 | HOMER1 | ENSACAP00000012829 | ENSACAP00000016469 | Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. | Homer scaffold protein 1. | 0.656 |
CLIC5 | HOPX | ENSACAP00000012829 | ENSACAP00000002483 | Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. | HOP homeobox. | 0.448 |
HOMER1 | CLIC5 | ENSACAP00000016469 | ENSACAP00000012829 | Homer scaffold protein 1. | Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. | 0.656 |
HOMER1 | HOPX | ENSACAP00000016469 | ENSACAP00000002483 | Homer scaffold protein 1. | HOP homeobox. | 0.534 |
HOPX | CELSR1 | ENSACAP00000002483 | ENSACAP00000007545 | HOP homeobox. | Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family. | 0.454 |
HOPX | CLIC5 | ENSACAP00000002483 | ENSACAP00000012829 | HOP homeobox. | Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. | 0.448 |
HOPX | HOMER1 | ENSACAP00000002483 | ENSACAP00000016469 | HOP homeobox. | Homer scaffold protein 1. | 0.534 |
HOPX | LGR4 | ENSACAP00000002483 | ENSACAP00000015587 | HOP homeobox. | Leucine rich repeat containing G protein-coupled receptor 4. | 0.509 |
HOPX | LGR5 | ENSACAP00000002483 | ENSACAP00000007153 | HOP homeobox. | Leucine rich repeat containing G protein-coupled receptor 5. | 0.491 |
HOPX | LRIG1 | ENSACAP00000002483 | ENSACAP00000002448 | HOP homeobox. | Leucine rich repeats and immunoglobulin like domains 1. | 0.465 |
HOPX | NKX2-5 | ENSACAP00000002483 | ENSACAP00000014860 | HOP homeobox. | NK2 homeobox 5. | 0.418 |
HOPX | OTP | ENSACAP00000002483 | ENSACAP00000007544 | HOP homeobox. | Orthopedia homeobox. | 0.410 |
HOPX | SRF | ENSACAP00000002483 | ENSACAP00000004716 | HOP homeobox. | Serum response factor. | 0.417 |
LGR4 | HOPX | ENSACAP00000015587 | ENSACAP00000002483 | Leucine rich repeat containing G protein-coupled receptor 4. | HOP homeobox. | 0.509 |
LGR4 | LGR5 | ENSACAP00000015587 | ENSACAP00000007153 | Leucine rich repeat containing G protein-coupled receptor 4. | Leucine rich repeat containing G protein-coupled receptor 5. | 0.968 |
LGR5 | HOPX | ENSACAP00000007153 | ENSACAP00000002483 | Leucine rich repeat containing G protein-coupled receptor 5. | HOP homeobox. | 0.491 |
LGR5 | LGR4 | ENSACAP00000007153 | ENSACAP00000015587 | Leucine rich repeat containing G protein-coupled receptor 5. | Leucine rich repeat containing G protein-coupled receptor 4. | 0.968 |
LRIG1 | HOPX | ENSACAP00000002448 | ENSACAP00000002483 | Leucine rich repeats and immunoglobulin like domains 1. | HOP homeobox. | 0.465 |
NKX2-5 | HOPX | ENSACAP00000014860 | ENSACAP00000002483 | NK2 homeobox 5. | HOP homeobox. | 0.418 |
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