STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP4UTP4 small subunit processome component. (393 aa)    
Predicted Functional Partners:
UTP18
UTP18 small subunit processome component.
   
 0.999
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.999
heatr1
U3snoRNP10 domain-containing protein.
   
 0.999
BYSL
Bystin like.
   
 
 0.999
RRP7A
Ribosomal RNA processing 7 homolog A.
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
NOP58
NOP58 ribonucleoprotein.
   
 0.999
NOP56
NOP56 ribonucleoprotein.
   
 0.999
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.999
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.999
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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